| Data retrieval |
- Asymmetric unit, PDB entry:
[header only] [complete with coordinates] (1110 Kb) [Save to disk]
 - Biological Unit Coordinates (1d1d.pdb1.gz) 56 Kb
- CSU: Contacts of Structural Units for 1D1D
- Original NMR restraints
for 1D1D from PDB
- Experimental data,
such as chemical shifts, at BioMagResBank (BMRB)
-
NMR Restraints Grid from BioMagResBank (BMRB)
- Retrieve 1D1D in mmCIF format [Save to disk]
- SEQRES to COORDINATES
correlation for 1D1D
from S2C,
[Save to disk]
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| View 1D1D in 3D |
-
Proteopedia, because life has more than 2D.
- On Jmol, a nice Rasmol like molecule viewer.
This is good for easiest viewing of basic structure.
- On FirstGlance, an
excellent tool for a guided tour on the structure components, by
E. Martz.
|
| Visual 3D analysis of 1D1D |
- Ramachandran
plot from PDBSum
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| Structure-derived information |
- Dipole moment, from Dipole Server at Weizmann Institute
- 3D motif for 1D1D,
from MSDmotif at EBI
- Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1d1da2, region A:11-150
[Jmol]
[rasmolscript]
[script source]
- Domain d1d1da1, region A:151-230
[Jmol]
[rasmolscript]
[script source]
- Class (fold), Architecture (subfold), Topology, Homologous superfamily from
CATH
- Summaries and structural analyses of PDB data files from
PDBSum
- Identification of Protein Pockets & Cavities at
CASTp
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| Sequence-derived information |
- View one-letter amino acid or nucleotide sequence for each chain: [1d1d_A] [1d1d]
- SWISS-PROT database: [O92954]
- Domain organization of [O92954_RSVSB] by SWISSPFAM
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|
Other resources with information on 1D1D |
- Community annotation for 1D1D at PDBWiki (http://pdbwiki.org)
- NMR Ensemble (OLDERADO: core, domain and representative structure database)
- MMDB (Entrez's Structure Database)
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| Movements, Movies and Images |
- Images
from IMB Jena Image Library
of Biological Macromolecules.
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