1D7M COILED-COIL DIMERIZATION DOMAIN FROM CORTEXILLIN I date
authors Burkhard, P., Kammerer, R.A., Steinmetz, M.O., Bourenkov, G.P., Aebi, U.
compound source
symmetry
R_factor
R_Free 0.2490000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.70
Primary referenceThe coiled-coil trigger site of the rod domain of cortexillin I unveils a distinct network of interhelical and intrahelical salt bridges., Burkhard P, Kammerer RA, Steinmetz MO, Bourenkov GP, Aebi U, Structure Fold Des 2000 Mar 15;8(3):223-30. PMID:10745004
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1d7m.pdb1.gz) 35 Kb
  • Biological Unit Coordinates (1d7m.pdb2.gz) 69 Kb
  • CSU: Contacts of Structural Units for 1D7M
  • Likely Quarternary Molecular Structure file(s) for 1D7M
  • Structure Factors (114 Kb)
  • Retrieve 1D7M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1D7M from S2C, [Save to disk]
  • Re-refined 1d7m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1D7M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1D7M
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1D7M, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1d7ma_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1d7mb_, region B [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1d7m] [1d7m_B] [1d7m_A]
  • SWISS-PROT database: [Q54HG2]
  • Domain organization of [CTXA_DICDI] by SWISSPFAM
    • Other resources with information on 1D7M
  • Community annotation for 1D7M at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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