1DE9 | Lyase Dna | date | Nov 13, 1999 |
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title | Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion | ||||||||||||||
authors | C.D.Mol, T.Izumi, S.Mitra, J.A.Tainer | ||||||||||||||
compound | source | ||||||||||||||
Molecule: 5'-D(Cptpapc)-3' Chain: X, U Engineered: Yes |
Synthetic: Yes | ||||||||||||||
Molecule: 5'-D(P(3dr)Pgpaptpc)-3' Chain: Y, V Engineered: Yes |
Synthetic: Yes | ||||||||||||||
Molecule: 5'-D(Gpaptpcpgpgptpapg)-3' Chain: Z, W Engineered: Yes |
Synthetic: Yes | ||||||||||||||
Molecule: Major Apurinicapyrimidinic Endonuclease Chain: A, B Fragment: Ape1 Synonym: Ape1 Ec: 4.2.99.18 Engineered: Yes |
Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 | ||||||||||||||
symmetry | Space Group: P 21 21 21 |
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crystal cell |
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method | X-Ray Diffraction | resolution | 3.00 Å | ||||||||||||
ligand | 3DR, MN | enzyme | Lyase E.C.4.2.99.18 BRENDA | ||||||||||||
related structures | by homologous chain: 1DE8 | ||||||||||||||
Gene Ontology |
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Primary reference | DNA-bound structures and mutants reveal abasic DNA binding by APE1 and DNA repair coordination [corrected], Mol CD, Izumi T, Mitra S, Tainer JA, Nature 2000 Jan 27;403(6768):451-6. PMID:10667800 |
Data retrieval |
View 1DE9 in 3D |
Visual 3D analysis of 1DE9 |
Structure-derived information |
- Domain d1de9a_, region A [Jmol] [rasmolscript] [script source] - Domain d1de9b_, region B [Jmol] [rasmolscript] [script source] |
Sequence-derived information |
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