1DFG Oxidoreductase date Jan 16, 1997
title X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bou Benzo-Diazaborine
authors C.Baldock, J.B.Rafferty, D.W.Rice
compound source
Molecule: Enoyl Acyl Carrier Protein Reductase
Chain: A, B
Synonym: Enr
Ec: 1.3.1.9
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_plasmid: Penvm5
symmetry Space Group: P 61 2 2
R_factor 0.173 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
80.600 80.600 325.300 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand NAD, NDT enzyme Oxidoreductase E.C.1.3.1.9 BRENDA
note 1DFG (Molecule of the Month:pdb90)
related structures by homologous chain: 1I2Z, 1I30
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceA mechanism of drug action revealed by structural studies of enoyl reductase., Baldock C, Rafferty JB, Sedelnikova SE, Baker PJ, Stuitje AR, Slabas AR, Hawkes TR, Rice DW, Science 1996 Dec 20;274(5295):2107-10. PMID:8953047
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk]
  • Biological Unit Coordinates (1dfg.pdb1.gz) 156 Kb
  • LPC: Ligand-Protein Contacts for 1DFG
  • CSU: Contacts of Structural Units for 1DFG
  • Likely Quarternary Molecular Structure file(s) for 1DFG
  • Retrieve 1DFG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DFG from S2C, [Save to disk]
  • View 1DFG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1DFG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1DFG, from MSDmotif at EBI
  • Genome occurence of 1DFG's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dfga_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1dfgb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dfg] [1dfg_A] [1dfg_B]
  • SWISS-PROT database: [P0AEK4]
  • Domain organization of [FABI_ECOLI] by SWISSPFAM
  • Other resources with information on 1DFG
  • Community annotation for 1DFG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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