1DIN Hydrolytic Enzyme date Mar 14, 1996
title Dienelactone Hydrolase At 2.8 Angstroms
authors D.L.Ollis, D.Pathak
compound source
Molecule: Dienelactone Hydrolase
Chain: A
Synonym: Dlh
Ec: 3.1.1.45
Engineered: Yes
Organism_scientific: Pseudomonas Knackmussii
Organism_taxid: 65741
Strain: B13
Gene: Clc D
Expression_system: Pseudomonas Sp.
Expression_system_taxid: 306
Expression_system_plasmid: Pdc100
Expression_system_gene: Clc D
symmetry Space Group: P 21 21 21
R_factor 0.150 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.900 71.450 78.240 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand CSD enzyme Hydrolase E.C.3.1.1.45 BRENDA
related structures by homologous chain: 1GGV
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceRefined structure of dienelactone hydrolase at 1.8 A., Pathak D, Ollis D, J Mol Biol 1990 Jul 20;214(2):497-525. PMID:2380986
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (1din.pdb1.gz) 43 Kb
  • LPC: Ligand-Protein Contacts for 1DIN
  • CSU: Contacts of Structural Units for 1DIN
  • Likely Quarternary Molecular Structure file(s) for 1DIN
  • Retrieve 1DIN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DIN from S2C, [Save to disk]
  • View 1DIN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1DIN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1DIN, from MSDmotif at EBI
  • Genome occurence of 1DIN's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1din__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1din] [1din_A]
  • SWISS-PROT database: [P0A115]
  • Domain organization of [CLCD_PSESB] by SWISSPFAM
  • Other resources with information on 1DIN
  • Community annotation for 1DIN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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