1DJ2	Ligase	date	Dec 01, 1999
title	Structures Of Adenylosuccinate Synthetase From Triticum Aest Arabidopsis Thaliana
authors	L.Prade, S.W.Cowan-Jacob, P.Chemla, S.Potter, E.Ward, R.Fonne-Pfi
compound		source
Molecule: Adenylosuccinate Synthetase Chain: A, B Ec: 6.3.4.4 Engineered: Yes		Organism_scientific: Arabidopsis Thaliana Organism_common: Thale Cress Organism_taxid: 3702 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_cellular_location: Cytosol Expression_system_vector: Pet16b
symmetry	Space Group: I 2 3	R_factor 0.233 R_Free 0.273
crystal cell	length a length b length c angle alpha angle beta angle gamma 212.760 212.760 212.760 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.90 Å
ligand	GDP	enzyme	Ligase E.C.6.3.4.4 BRENDA
related structures	by homologous chain: 1DJ3
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structures of adenylosuccinate synthetase from Triticum aestivum and Arabidopsis thaliana., Prade L, Cowan-Jacob SW, Chemla P, Potter S, Ward E, Fonne-Pfister R, J Mol Biol 2000 Feb 18;296(2):569-77. PMID:10669609

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk] Biological Unit Coordinates (1dj2.pdb1.gz) 131 Kb LPC: Ligand-Protein Contacts for 1DJ2 CSU: Contacts of Structural Units for 1DJ2 Likely Quarternary Molecular Structure file(s) for 1DJ2 Retrieve 1DJ2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1DJ2 from S2C, [Save to disk]

View 1DJ2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1DJ2

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1DJ2, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1dj2a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1dj2b_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1dj2_B] [1dj2_A] [1dj2] SWISS-PROT database: [Q96529] Domain organization of [PURA_ARATH] by SWISSPFAM Domain found in 1DJ2: [Adenylsucc_synt ] by SMART

Other resources with information on 1DJ2

Community annotation for 1DJ2 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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Images from IMB Jena Image Library of Biological Macromolecules.

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