1DMJ	Oxidoreductase	date	Dec 14, 1999
title	Bovine Endothelial Nitric Oxide Synthase Heme Domain Complex 6-Cyclic-Tetrahydropteridine
authors	P.Kotsonis, L.G.Frohlich, C.S.Raman, H.Li, M.Berg, R.Gerwig, V.Gro Y.Kang, N.Al-Masoudi, S.Taghavi-Moghadam, D.Mohr, U.Munch, J.Sch P.Martasek, B.S.Masters, H.Strobel, T.Poulos, H.Matter, W.Pfleid H.H.Schmidt
compound		source
Molecule: Nitric Oxide Synthase Chain: A, B Fragment: Heme Domain Ec: 1.14.13.39 Engineered: Yes		Organism_scientific: Bos Taurus Organism_common: Cattle Organism_taxid: 9913 Cell: Endothelial Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.187 R_Free 0.228
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.900 106.490 156.550 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.35 Å
ligand	ACT, AP4, CAC, GOL, HEM, ITU, ZN BindingDB	enzyme	Oxidoreductase E.C.1.14.13.39 BRENDA
related structures	by homologous chain: 2NSE, 7NSE
Gene Ontology	Chain Function Process Component A, B
Primary reference	Structural basis for pterin antagonism in nitric-oxide synthase. Development of novel 4-oxo-pteridine antagonists of (6R)-5,6,7,8-tetrahydrobiopterin., Kotsonis P, Frohlich LG, Raman CS, Li H, Berg M, Gerwig R, Groehn V, Kang Y, Al-Masoudi N, Taghavi-Moghadam S, Mohr D, Munch U, Schnabel J, Martasek P, Masters BS, Strobel H, Poulos T, Matter H, Pfleiderer W, Schmidt HH, J Biol Chem 2001 Dec 28;276(52):49133-41. PMID:11590164

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (150 Kb) [Save to disk] Biological Unit Coordinates (1dmj.pdb1.gz) 143 Kb LPC: Ligand-Protein Contacts for 1DMJ CSU: Contacts of Structural Units for 1DMJ Likely Quarternary Molecular Structure file(s) for 1DMJ Structure Factors (391 Kb) Retrieve 1DMJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1DMJ from S2C, [Save to disk] Re-refined 1dmj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1DMJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1DMJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1DMJ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1dmja_, region A [Jmol] [rasmolscript] [script source]     - Domain d1dmjb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1dmj_B] [1dmj_A] [1dmj] SWISS-PROT database: [P29473] Domain organization of [NOS3_BOVIN] by SWISSPFAM

Other resources with information on 1DMJ

Community annotation for 1DMJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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