1DQV	Endocytosis Exocytosis	date	Jan 05, 2000
title	Crystal Structure Of Synaptotagmin III C2ac2b
authors	R.B.Sutton, J.A.Ernst, A.T.Brunger
compound		source
Molecule: Synaptotagmin III Chain: A Fragment: C2ac2b Engineered: Yes Other_details: Soluble Portion		Organism_scientific: Rattus Rattus Organism_common: Black Rat Organism_taxid: 10117 Organ: Brain Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_plasmid: Pet28a
symmetry	Space Group: P 62 2 2	R_factor 0.293 R_Free 0.349
crystal cell	length a length b length c angle alpha angle beta angle gamma 125.959 125.959 118.438 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.20 Å
ligand	MG, SO4	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of the cytosolic C2A-C2B domains of synaptotagmin III. Implications for Ca(+2)-independent snare complex interaction., Sutton RB, Ernst JA, Brunger AT, J Cell Biol 1999 Nov 1;147(3):589-98. PMID:10545502

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk] Biological Unit Coordinates (1dqv.pdb1.gz) 43 Kb Biological Unit Coordinates (1dqv.pdb2.gz) 168 Kb LPC: Ligand-Protein Contacts for 1DQV CSU: Contacts of Structural Units for 1DQV Likely Quarternary Molecular Structure file(s) for 1DQV Retrieve 1DQV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1DQV from S2C, [Save to disk]

View 1DQV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1DQV

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1DQV, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1dqva1, region A:295-424 [Jmol] [rasmolscript] [script source]     - Domain d1dqva2, region A:425-569 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1dqv] [1dqv_A] SWISS-PROT database: [P40748] Domain organization of [SYT3_RAT] by SWISSPFAM Domain found in 1DQV: [C2 ] by SMART

Other resources with information on 1DQV

Community annotation for 1DQV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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