1E0W Hydrolase date Apr 10, 2000
title Xylanase 10a From Sreptomyces Lividans. Native Structure At 1.2 Angstrom Resolution
authors V.Ducros, S.J.Charnock, U.Derewenda, Z.S.Derewenda, Z.Dauter, C.D F.Shareck, R.Morosoli, D.Kluepfel, G.J.Davies
compound source
Molecule: Endo-1,4-Beta-Xylanase A
Chain: A
Fragment: Catalytic Module, Residues 42-343
Synonym: Xylanase A, 1,4-Beta-D-Xylan Xylanohydrolase A, Xy
Ec: 3.2.1.8
Engineered: Yes
Organism_scientific: Streptomyces Lividans
Organism_taxid: 1916
Expression_system: Streptomyces Lividans
Expression_system_taxid: 1916
Expression_system_strain: Iaf 19
symmetry Space Group: P 21 21 21
R_factor 0.098 R_Free 0.124
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.250 46.930 86.390 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.2 Å
ligand
enzyme Hydrolase E.C.3.2.1.8 BRENDA
related structures by homologous chain: 1E0X, 1V0N
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSubstrate specificity in glycoside hydrolase family 10. Structural and kinetic analysis of the Streptomyces lividans xylanase 10A., Ducros V, Charnock SJ, Derewenda U, Derewenda ZS, Dauter Z, Dupont C, Shareck F, Morosoli R, Kluepfel D, Davies GJ, J Biol Chem. 2000 Jul 28;275(30):23020-6. PMID:10930426
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • Biological Unit Coordinates (1e0w.pdb1.gz) 114 Kb
  • CSU: Contacts of Structural Units for 1E0W
  • Likely Quarternary Molecular Structure file(s) for 1E0W
  • Structure Factors (574 Kb)
  • Retrieve 1E0W in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E0W from S2C, [Save to disk]
  • Re-refined 1e0w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1E0W in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1E0W
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1E0W from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1E0W, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e0wa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e0w] [1e0w_A]
  • SWISS-PROT database: [P26514]
  • Domain organization of [XYNA_STRLI] by SWISSPFAM
  • Domain found in 1E0W: [Glyco_10 ] by SMART
  • Other resources with information on 1E0W
  • Community annotation for 1E0W at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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