1E1F Hydrolase date May 03, 2000
title Crystal Structure Of A Monocot (Maize Zmglu1) Beta-Glucosida Complex With P-Nitrophenyl-Beta-D-Thioglucoside
authors M.Czjzek, M.Cicek, D.R.Bevan, B.Henrissat, A.Esen
compound source
Molecule: Beta-Glucosidase
Chain: A, B
Ec: 3.2.1.21
Engineered: Yes
Organism_scientific: Zea Mays
Organism_common: Maize
Organism_taxid: 4577
Strain: Cv. Mutin
Tissue: Coleoptile
Organelle: Chloroplast
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_cell: Plys S Cells
Expression_system_plasmid: Pet-21a
Expression_system_gene: Glu1
symmetry Space Group: P 1 21 1
R_factor 0.199 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.640 118.150 80.880 90.00 94.33 90.00
method X-Ray Diffractionresolution 2.60 Å
ligand PSG enzyme Hydrolase E.C.3.2.1.21 BRENDA
related structures by homologous chain: 1E1E
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of a monocotyledon (maize ZMGlu1) beta-glucosidase and a model of its complex with p-nitrophenyl beta-D-thioglucoside., Czjzek M, Cicek M, Zamboni V, Burmeister WP, Bevan DR, Henrissat B, Esen A, Biochem J 2001 Feb 15;354(Pt 1):37-46. PMID:11171077
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (169 Kb) [Save to disk]
  • Biological Unit Coordinates (1e1f.pdb1.gz) 162 Kb
  • LPC: Ligand-Protein Contacts for 1E1F
  • CSU: Contacts of Structural Units for 1E1F
  • Likely Quarternary Molecular Structure file(s) for 1E1F
  • Structure Factors (271 Kb)
  • Retrieve 1E1F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E1F from S2C, [Save to disk]
  • Re-refined 1e1f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1E1F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1E1F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1E1F, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e1fa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1e1fb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e1f_A] [1e1f] [1e1f_B]
  • SWISS-PROT database: [P49235]
  • Domain organization of [BGLC_MAIZE] by SWISSPFAM
  • Other resources with information on 1E1F
  • Community annotation for 1E1F at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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