1E3I	Oxidoreductase	date	Jun 16, 2000
title	Mouse Class II Alcohol Dehydrogenase Complex With Nadh And I
authors	S.Svensson, J.O.Hoog, G.Schneider, T.Sandalova
compound		source
Molecule: Alcohol Dehydrogenase, Class II Chain: A, B Ec: 1.1.1.1 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Organ: Liver Gene: Adh-2 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
symmetry	Space Group: P 21 21 21	R_factor 0.198 R_Free 0.228
crystal cell	length a length b length c angle alpha angle beta angle gamma 79.253 81.070 102.187 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.08 Å
ligand	CXF, NAI, ZN	enzyme	Oxidoreductase E.C.1.1.1.1 BRENDA
related structures	by homologous chain: 1E3E
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal structures of mouse class II alcohol dehydrogenase reveal determinants of substrate specificity and catalytic efficiency., Svensson S, Hoog JO, Schneider G, Sandalova T, J Mol Biol. 2000 Sep 15;302(2):441-53. PMID:10970744

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk] Biological Unit Coordinates (1e3i.pdb1.gz) 120 Kb LPC: Ligand-Protein Contacts for 1E3I CSU: Contacts of Structural Units for 1E3I Likely Quarternary Molecular Structure file(s) for 1E3I Structure Factors (252 Kb) Retrieve 1E3I in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1E3I from S2C, [Save to disk] Re-refined 1e3i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1E3I in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1E3I

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1E3I, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1e3ia1, region A:1-167,A:342-376 [Jmol] [rasmolscript] [script source]     - Domain d1e3ia2, region A:168-341 [Jmol] [rasmolscript] [script source]     - Domain d1e3ib2, region B:168-341 [Jmol] [rasmolscript] [script source]     - Domain d1e3ib1, region B:4-167,B:342-376 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1e3i] [1e3i_A] [1e3i_B] SWISS-PROT database: [Q9QYY9] Domain organization of [ADH4_MOUSE] by SWISSPFAM

Other resources with information on 1E3I

Community annotation for 1E3I at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 1E3I from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---