1E46 Aldolase (Class Ii) date Jun 30, 2000
title L-Fuculose 1-Phosphate Aldolase From Escherichia Coli Mutant
authors A.C.Joerger, G.E.Schulz
compound source
Molecule: L-Fuculose 1-Phosphate Aldolase
Chain: P
Ec: 4.1.2.17
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm 105
Expression_system_plasmid: Pkkfa2-E73s
Other_details: E73s Mutation Performed With Phosphorothioat Using M13mp19
symmetry Space Group: P 4 21 2
R_factor 0.149 R_Free 0.229
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.100 94.100 43.500 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.55 Å
ligand BME, SO4, ZN enzyme Lyase E.C.4.1.2.17 BRENDA
related structures by homologous chain: 1E49, 3FUA
Gene
Ontology
ChainFunctionProcessComponent
P


Primary referenceStructures of l-fuculose-1-phosphate aldolase mutants outlining motions during catalysis., Joerger AC, Mueller-Dieckmann C, Schulz GE, J Mol Biol 2000 Nov 3;303(4):531-43. PMID:11054289
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (41 Kb) [Save to disk]
  • Biological Unit Coordinates (1e46.pdb1.gz) 138 Kb
  • LPC: Ligand-Protein Contacts for 1E46
  • CSU: Contacts of Structural Units for 1E46
  • Likely Quarternary Molecular Structure file(s) for 1E46
  • Structure Factors (58 Kb)
  • Retrieve 1E46 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E46 from S2C, [Save to disk]
  • Re-refined 1e46 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1E46 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1E46
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1E46, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e46p_, region P [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e46] [1e46_P]
  • SWISS-PROT database: [P0AB87]
  • Domain organization of [FUCA_ECOLI] by SWISSPFAM
  • Domain found in 1E46: [Aldolase_II ] by SMART
  • Other resources with information on 1E46
  • Community annotation for 1E46 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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