1E5U Intimin date Aug 02, 2000
title Nmr Representative Structure Of Intimin-190 (Int190) From Enteropathogenic E. Coli
authors S.Prasannan, S.J.Matthews, M.Batchelor, S.Daniell, S.Reece, G.Frankel, G.Dougan, I.Connerton, G.Bloomberg
compound source
Molecule: Intimin
Chain: I
Fragment: C-Terminal 190 Residue-Fragment
Synonym: Int190
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Strain: Enteropathogenic Serotype O127\:H6
Variant: Strain E234869
Cell: Bacterial
Cellular_location: Outer Membranesurface
Gene: Eae
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_plasmid: Pet3aplyss
Expression_system_gene: Eae [Truncation]
Other_details: Recombinant
methodSolution NMR
note 1E5U supersedes 1E1B, 1INM
related structures by homologous chain: 1F02
Primary referenceStructural basis for recognition of the translocated intimin receptor (Tir) by intimin from enteropathogenic Escherichia coli., Batchelor M, Prasannan S, Daniell S, Reece S, Connerton I, Bloomberg G, Dougan G, Frankel G, Matthews S, EMBO J 2000 Jun 1;19(11):2452-64. PMID:10835344
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1E5U
  • Original NMR restraints for 1E5U from PDB
  • Retrieve 1E5U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E5U from S2C, [Save to disk]
  • View 1E5U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1E5U
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1E5U, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e5ui1, region I:1-89 [Jmol] [rasmolscript] [script source]
        - Domain d1e5ui2, region I:90-187 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e5u_I] [1e5u]
  • SWISS-PROT database: [P19809]
  • Domain organization of [EAE_ECO27] by SWISSPFAM
  • Domain found in 1E5U: [BID_2 ] by SMART
  • Other resources with information on 1E5U
  • Community annotation for 1E5U at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science