1EE3 Cadmium-substituted bovine pancreatic carboxypeptidase A (alfa-form) at pH 7.5 and 2 mM chloride in monoclinic crystal form date
authors Jensen, F., Bukrinsky, T., Bjerrum, J., Larsen, S.
compound source
symmetry
R_factor
R_Free 0.198
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70
ligand CD enzyme
related structures by homologous chain: 1ARM, 1DTD
Gene
Ontology
ChainFunctionProcessComponent
P


Primary referenceThree high-resolution crystal structures of cadmium-substituted carboxypeptidase A provide insight into the enzymatic function., Jensen F, Bukrinsky T, Bjerrum J, Larsen S, J Biol Inorg Chem 2002 Apr;7(4-5):490-9. PMID:11941507
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (1ee3.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 1EE3
  • CSU: Contacts of Structural Units for 1EE3
  • Likely Quarternary Molecular Structure file(s) for 1EE3
  • Structure Factors (290 Kb)
  • Retrieve 1EE3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EE3 from S2C, [Save to disk]
  • Re-refined 1ee3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1EE3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EE3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EE3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ee3p_, region P [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ee3] [1ee3_P]
  • SWISS-PROT database: [P00730]
  • Domain organization of [CBPA1_BOVIN] by SWISSPFAM
  • Domain found in 1EE3: [Zn_pept ] by SMART
  • Other resources with information on 1EE3
  • Community annotation for 1EE3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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