1EEM Transferase date Feb 01, 2000
title Glutathione Transferase From Homo Sapiens
authors P.Board, M.Coggan, G.Chelvanayagam, S.Easteal, L.S.Jermiin, G.K.S D.E.Danley, L.R.Hoth, M.C.Griffor, A.V.Kamath, M.H.Rosner, B.A.C D.E.Perregaux, C.A.Gabel, K.F.Geoghegan, J.Pandit
compound source
Molecule: Glutathione-S-Transferase
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_vector: Pgex2t
symmetry Space Group: P 31 2 1
R_factor 0.219 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.090 57.090 140.280 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand GSH, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • glutathione dehydrogenase (a...
  • negative regulation of ryano...
  • positive regulation of ryano...

  • Primary referenceIdentification, characterization, and crystal structure of the Omega class glutathione transferases., Board PG, Coggan M, Chelvanayagam G, Easteal S, Jermiin LS, Schulte GK, Danley DE, Hoth LR, Griffor MC, Kamath AV, Rosner MH, Chrunyk BA, Perregaux DE, Gabel CA, Geoghegan KF, Pandit J, J Biol Chem 2000 Aug 11;275(32):24798-806. PMID:10783391
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (46 Kb) [Save to disk]
  • Biological Unit Coordinates (1eem.pdb1.gz) 83 Kb
  • LPC: Ligand-Protein Contacts for 1EEM
  • CSU: Contacts of Structural Units for 1EEM
  • Likely Quarternary Molecular Structure file(s) for 1EEM
  • Structure Factors (125 Kb)
  • Retrieve 1EEM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EEM from S2C, [Save to disk]
  • Re-refined 1eem structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1EEM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EEM
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EEM, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1eema1, region A:103-241 [Jmol] [rasmolscript] [script source]
        - Domain d1eema2, region A:5-102 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1eem] [1eem_A]
  • SWISS-PROT database: [P78417]
  • Domain organization of [GSTO1_HUMAN] by SWISSPFAM
  • Other resources with information on 1EEM
  • Community annotation for 1EEM at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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