1EJL	Protein Binding	date	Mar 03, 2000
title	Mouse Importin Alpha-Sv40 Large T Antigen Nls Peptide Comple
authors	M.R.Fontes, T.Teh, B.Kobe
compound		source
Molecule: Sv40 Large T Antigen Nls Peptide Chain: A, B Fragment: Nls (Nuclear Localization Signal) Monopartite Pep Residues 126-132; Engineered: Yes		Synthetic: Yes Other_details: The Peptide Was Chemically Synthesized. The Of This Peptide Is Naturally Found In Simian Virus 40 T Ant (Sv40).;
Molecule: Importin Alpha Chain: I Fragment: Nls-Binding Domain, Residues 70-529 Synonym: Karyopherin Alpha Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_plasmid: Pet30a
symmetry	Space Group: P 21 21 21	R_factor 0.215 R_Free 0.254
crystal cell	length a length b length c angle alpha angle beta angle gamma 78.228 89.858 99.490 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.80 Å
related structures	by homologous chain: 1EJY, 1IQ1
Gene Ontology	Chain Function Process Component I
Primary reference	Structural basis of recognition of monopartite and bipartite nuclear localization sequences by mammalian importin-alpha., Fontes MR, Teh T, Kobe B, J Mol Biol 2000 Apr 14;297(5):1183-94. PMID:10764582

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk] Biological Unit Coordinates (1ejl.pdb1.gz) 67 Kb CSU: Contacts of Structural Units for 1EJL Likely Quarternary Molecular Structure file(s) for 1EJL Retrieve 1EJL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1EJL from S2C, [Save to disk]

View 1EJL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1EJL

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1EJL, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ejli_, region I [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ejl_A] [1ejl_B] [1ejl_I] [1ejl] SWISS-PROT database: [P52293] [P03070] Domain organization of [IMA2_MOUSE] [LT_SV40] by SWISSPFAM Domain found in 1EJL: [ARM ] by SMART

Other resources with information on 1EJL

Community annotation for 1EJL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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