1EO6 Protein Binding date Mar 22, 2000
title Crystal Structure Of Gate-16
authors Y.Paz, Z.Elazar, D.Fass
compound source
Molecule: Golgi-Associated Atpase Enhancer Of 16 Kd
Chain: A, B
Synonym: Gate-16
Engineered: Yes
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Brain
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Paed4
symmetry Space Group: P 1 21 1
R_factor 0.229 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.300 76.330 49.710 90.00 92.81 90.00
method X-Ray Diffractionresolution 1.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of GATE-16, membrane transport modulator and mammalian ortholog of autophagocytosis factor Aut7p., Paz Y, Elazar Z, Fass D, J Biol Chem 2000 Aug 18;275(33):25445-50. PMID:10856287
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (1eo6.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 1EO6
  • Likely Quarternary Molecular Structure file(s) for 1EO6
  • Structure Factors (253 Kb)
  • Retrieve 1EO6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EO6 from S2C, [Save to disk]
  • Re-refined 1eo6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1EO6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1EO6
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EO6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1eo6a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1eo6b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1eo6] [1eo6_A] [1eo6_B]
  • SWISS-PROT database: [P60519]
  • Domain organization of [GBRL2_BOVIN] by SWISSPFAM
    • Other resources with information on 1EO6
  • Community annotation for 1EO6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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