1EOJ	Hydrolase Hydrolase Inhibitor	date	Mar 23, 2000
title	Design Of P1' And P3' Residues Of Trivalent Thrombin Inhibit Their Crystal Structures
authors	J.J.Slon-Usakiewicz, J.Sivaraman, Y.Li, M.Cygler, Y.Konishi
compound		source
Molecule: Alpha Thrombin Chain: A Ec: 3.4.21.5		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606
Molecule: Thrombin Inhibitor P798 Chain: B Engineered: Yes		Synthetic: Yes Other_details: This Sequence Was Chemically Synthesized
symmetry	Space Group: C 1 2 1	R_factor 0.187 R_Free 0.233
crystal cell	length a length b length c angle alpha angle beta angle gamma 70.800 72.000 72.900 90.00 100.20 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	BBS, CPI, DOA, TIH	enzyme	Hydrolase E.C.3.4.21.5 BRENDA
related structures	by homologous chain: 1D3P, 1EOL
Gene Ontology	Chain Function Process Component A
Primary reference	Design of P1' and P3' residues of trivalent thrombin inhibitors and their crystal structures., Slon-Usakiewicz JJ, Sivaraman J, Li Y, Cygler M, Konishi Y, Biochemistry 2000 Mar 7;39(9):2384-91. PMID:10694407

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk] Biological Unit Coordinates (1eoj.pdb1.gz) 51 Kb LPC: Ligand-Protein Contacts for 1EOJ CSU: Contacts of Structural Units for 1EOJ Likely Quarternary Molecular Structure file(s) for 1EOJ Structure Factors (181 Kb) Retrieve 1EOJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1EOJ from S2C, [Save to disk] Re-refined 1eoj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1EOJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1EOJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1EOJ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1eoja_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1eoj_B] [1eoj_A] [1eoj] SWISS-PROT database: [P00734] Domain organization of [THRB_HUMAN] by SWISSPFAM Domain found in 1EOJ: [Tryp_SPc ] by SMART

Other resources with information on 1EOJ

Community annotation for 1EOJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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