1EUW Hydrolase date Apr 17, 2000
title Atomic Resolution Structure Of E. Coli Dutpase
authors A.Gonzalez, E.Cedergren, G.Larsson, R.Persson
compound source
Molecule: Deoxyuridine 5'-Triphosphate Nucleotidohydrolase
Chain: A
Synonym: Dutpase
Ec: 3.6.1.23
Organism_scientific: Escherichia Coli
Organism_taxid: 562
symmetry Space Group: H 3
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
85.742 85.742 61.749 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.05 Å
ligand EMC, GOL enzyme Hydrolase E.C.3.6.1.23 BRENDA
note 1EUW is a representative structure
related structures by homologous chain: 1EU5
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAtomic resolution structure of Escherichia coli dUTPase determined ab initio., Gonzalez A, Larsson G, Persson R, Cedergren-Zeppezauer E, Acta Crystallogr D Biol Crystallogr 2001 Jun;57(Pt 6):767-74. PMID:11375495
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (89 Kb) [Save to disk]
  • Biological Unit Coordinates (1euw.pdb1.gz) 250 Kb
  • LPC: Ligand-Protein Contacts for 1EUW
  • CSU: Contacts of Structural Units for 1EUW
  • Likely Quarternary Molecular Structure file(s) for 1EUW
  • Structure Factors (870 Kb)
  • Retrieve 1EUW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EUW from S2C, [Save to disk]
  • Re-refined 1euw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1EUW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EUW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1EUW from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EUW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1euwa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1euw_A] [1euw]
  • SWISS-PROT database: [P06968]
  • Domain organization of [DUT_ECOLI] by SWISSPFAM
  • Other resources with information on 1EUW
  • Community annotation for 1EUW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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