1EVI	Oxidoreductase	date	Apr 20, 2000
title	Three-Dimensional Structure Of The Purple Intermediate Of Po Kidney D-Amino Acid Oxidase
authors	H.Mizutani, I.Miyahara, K.Hirotsu, Y.Nishina, K.Shiga, C.Setoyama
compound		source
Molecule: D-Amino Acid Oxidase Chain: A, B Ec: 1.4.3.3 Engineered: Yes		Organism_scientific: Sus Scrofa Organism_common: Pig Organism_taxid: 9823 Organ: Kidney Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet11d
symmetry	Space Group: P 21 21 21	R_factor 0.232 R_Free 0.298
crystal cell	length a length b length c angle alpha angle beta angle gamma 107.730 91.370 71.240 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	2PC, FAD	enzyme	Oxidoreductase E.C.1.4.3.3 BRENDA
related structures	by homologous chain: 1AN9, 1KIF
Gene Ontology	Chain Function Process Component A, B
Primary reference	Three-dimensional structure of the purple intermediate of porcine kidney D-amino acid oxidase. Optimization of the oxidative half-reaction through alignment of the product with reduced flavin., Mizutani H, Miyahara I, Hirotsu K, Nishina Y, Shiga K, Setoyama C, Miura R, J Biochem (Tokyo) 2000 Jul;128(1):73-81. PMID:10876160

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (122 Kb) [Save to disk] Biological Unit Coordinates (1evi.pdb1.gz) 117 Kb LPC: Ligand-Protein Contacts for 1EVI CSU: Contacts of Structural Units for 1EVI Likely Quarternary Molecular Structure file(s) for 1EVI Retrieve 1EVI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1EVI from S2C, [Save to disk]

View 1EVI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1EVI

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1EVI, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1evia1, region A:1-194,A:288-340 [Jmol] [rasmolscript] [script source]     - Domain d1evia2, region A:195-287 [Jmol] [rasmolscript] [script source]     - Domain d1evib1, region B:1-194,B:288-340 [Jmol] [rasmolscript] [script source]     - Domain d1evib2, region B:195-287 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1evi] [1evi_A] [1evi_B] SWISS-PROT database: [P00371] Domain organization of [OXDA_PIG] by SWISSPFAM

Other resources with information on 1EVI

Community annotation for 1EVI at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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