1EY3 Lyase date May 05, 2000
title Structure Of Enoyl-Coa Hydratase Complexed With The Substrat
authors B.J.Bahnson, V.E.Anderson, G.A.Petsko
compound source
Molecule: Enoyl-Coa Hydratase
Chain: A, B, C, D, E, F
Synonym: Crotonase
Ec: 4.2.1.17
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Organ: Liver
Organelle: Mitochondria
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet20b(+)
symmetry Space Group: P 21 21 21
R_factor 0.181 R_Free 0.220
crystal
cell
length a length b length c angle alpha angle beta angle gamma
141.748 145.286 78.562 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand DAK enzyme Lyase E.C.4.2.1.17 BRENDA
related structures by homologous chain: 1MJ3, 2DUB
Gene
Ontology
ChainFunctionProcessComponent
F, A, D, C, E, B


Primary referenceStructural mechanism of enoyl-CoA hydratase: three atoms from a single water are added in either an E1cb stepwise or concerted fashion., Bahnson BJ, Anderson VE, Petsko GA, Biochemistry 2002 Feb 26;41(8):2621-9. PMID:11851409
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (257 Kb) [Save to disk]
  • Biological Unit Coordinates (1ey3.pdb1.gz) 250 Kb
  • LPC: Ligand-Protein Contacts for 1EY3
  • CSU: Contacts of Structural Units for 1EY3
  • Likely Quarternary Molecular Structure file(s) for 1EY3
  • Structure Factors (524 Kb)
  • Retrieve 1EY3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EY3 from S2C, [Save to disk]
  • Re-refined 1ey3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1EY3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EY3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EY3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ey3a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ey3b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1ey3c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1ey3d_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1ey3e_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1ey3f_, region F [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ey3_D] [1ey3_E] [1ey3_A] [1ey3] [1ey3_F] [1ey3_B] [1ey3_C]
  • SWISS-PROT database: [P14604]
  • Domain organization of [ECHM_RAT] by SWISSPFAM
  • Other resources with information on 1EY3
  • Community annotation for 1EY3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science