1F0I	Hydrolase	date	May 16, 2000
title	The First Crystal Structure Of A Phospholipase D
authors	I.Leiros, F.Secundo, C.Zambonelli, S.Servi, E.Hough
compound		source
Molecule: Phospholipase D Chain: A Ec: 3.1.4.4		Organism_scientific: Streptomyces Sp. Organism_taxid: 172564 Strain: Pmf
symmetry	Space Group: P 1 21 1	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 57.280 57.420 68.700 90.00 93.17 90.00
method	X-Ray Diffraction	resolution	1.40 Å
ligand	PO4	enzyme	Hydrolase E.C.3.1.4.4 BRENDA
related structures	by homologous chain: 1V0U, 1V0W
Gene Ontology	Chain Function Process Component A
Primary reference	The first crystal structure of a phospholipase D., Leiros I, Secundo F, Zambonelli C, Servi S, Hough E, Structure Fold Des 2000 Jun 15;8(6):655-67. PMID:10873862

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk] Biological Unit Coordinates (1f0i.pdb1.gz) 89 Kb LPC: Ligand-Protein Contacts for 1F0I CSU: Contacts of Structural Units for 1F0I Likely Quarternary Molecular Structure file(s) for 1F0I Retrieve 1F0I in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1F0I from S2C, [Save to disk]

View 1F0I in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1F0I

Ramachandran plot from PDBSum

Structure-derived information

Conformational Epitope Prediction for 1F0I from the CEP Server. Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1F0I, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1f0ia2, region A:264-514 [Jmol] [rasmolscript] [script source]     - Domain d1f0ia1, region A:6-263 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1f0i_A] [1f0i] SWISS-PROT database: [P84147] Domain organization of [P84147_STRSM] by SWISSPFAM Domain found in 1F0I: [PLDc ] by SMART

Other resources with information on 1F0I

Community annotation for 1F0I at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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