1F27 CRYSTAL STRUCTURE OF A BIOTIN-BINDING RNA PSEUDOKNOT date
authors Nix, J., Sussman, D., Wilson, C.
compound source
symmetry
R_factor
R_Free 0.2380000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.30
ligand BTN, MG enzyme
Primary referenceThe 1.3 A crystal structure of a biotin-binding pseudoknot and the basis for RNA molecular recognition., Nix J, Sussman D, Wilson C, J Mol Biol 2000 Mar 10;296(5):1235-44. PMID:10698630
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (22 Kb) [Save to disk]
  • Biological Unit Coordinates (1f27.pdb1.gz) 17 Kb
  • LPC: Ligand-Protein Contacts for 1F27
  • CSU: Contacts of Structural Units for 1F27
  • Likely Quarternary Molecular Structure file(s) for 1F27
  • Retrieve 1F27 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1F27 from S2C, [Save to disk]
  • View 1F27 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1F27
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1F27, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1f27] [1f27_A] [1f27_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1F27
  • Community annotation for 1F27 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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