1F3K Toxin date Jun 05, 2000
title Three-Dimensional Solution Structure Of Omega-Conotoxin Txvi Type Calcium Channel Blocker
authors K.Kobayashi, T.Sasaki, K.Sato, T.Kohno
compound source
Molecule: Omega-Conotoxin Txvii
Chain: A
Engineered: Yes
 Synthetic: Yes
Other_details: This Peptide Was Chemically Synthesized. The Of This Peptide Naturally Occurs In Conus Textile.
methodSolution NMR
note 1F3K is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThree-dimensional solution structure of omega-conotoxin TxVII, an L-type calcium channel blocker., Kobayashi K, Sasaki T, Sato K, Kohno T, Biochemistry 2000 Dec 5;39(48):14761-7. PMID:11101291
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (102 Kb) [Save to disk]
  • Biological Unit Coordinates (1f3k.pdb1.gz) 6 Kb
  • CSU: Contacts of Structural Units for 1F3K
  • Retrieve 1F3K in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1F3K from S2C, [Save to disk]
    • View 1F3K in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1F3K
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1F3K, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1f3ka_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1f3k] [1f3k_A]
  • SWISS-PROT database: [P56714]
  • Domain organization of [CO7_CONTE] by SWISSPFAM
    • Other resources with information on 1F3K
  • Community annotation for 1F3K at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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