1F3V	Apoptosis	date	Jun 06, 2000
title	Crystal Structure Of The Complex Between The N-Terminal Doma Tradd And The Traf Domain Of Traf2
authors	Y.C.Park, H.Ye, C.Hsia, D.Segal, R.Rich, H.C.Liou, D.Myszka, H.Wu
compound		source
Molecule: Tumor Necrosis Factor Receptor Type 1 Associated Domain Protein; Chain: A Fragment: N-Terminal Domain Synonym: Tradd, Tnfr1-Associated Death Domain Protein Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet
Molecule: Tumor Necrosis Factor Receptor-Associated Protein Chain: B Fragment: Traf Domain Synonym: Traf2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet
symmetry	Space Group: H 3	R_factor 0.229 R_Free 0.261
crystal cell	length a length b length c angle alpha angle beta angle gamma 132.400 132.400 62.800 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	MSE	enzyme
related structures	by homologous chain: 1CA4, 1D0A, 1F2H
Gene Ontology	Chain Function Process Component A B
Primary reference	A novel mechanism of TRAF signaling revealed by structural and functional analyses of the TRADD-TRAF2 interaction., Park YC, Ye H, Hsia C, Segal D, Rich RL, Liou HC, Myszka DG, Wu H, Cell 2000 Jun 23;101(7):777-87. PMID:10892748

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk] Biological Unit Coordinates (1f3v.pdb1.gz) 57 Kb LPC: Ligand-Protein Contacts for 1F3V CSU: Contacts of Structural Units for 1F3V Likely Quarternary Molecular Structure file(s) for 1F3V Retrieve 1F3V in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1F3V from S2C, [Save to disk]

View 1F3V in 3D

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Visual 3D analysis of 1F3V

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1F3V, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1f3va_, region A [Jmol] [rasmolscript] [script source]     - Domain d1f3vb2, region B:331-349 [Jmol] [rasmolscript] [script source]     - Domain d1f3vb1, region B:350-501 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1f3v_B] [1f3v_A] [1f3v] SWISS-PROT database: [Q15628] [Q12933] Domain organization of [TRADD_HUMAN] [TRAF2_HUMAN] by SWISSPFAM Domain found in 1F3V: [MATH ] by SMART

Other resources with information on 1F3V

Community annotation for 1F3V at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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