1F7P	Viral Protein, Hydrolase	date	Jun 27, 2000
title	Crystal Structures Of Feline Immunodeficiency Virus Dutp Pyrophosphatase And Its Nucleotide Complexes In Three Cryst
authors	G.S.Prasad, E.A.Stura, J.H.Elder, C.D.Stout
compound		source
Molecule: Pol Polyprotein Chain: A, B, C Fragment: Dutpase Ec: 3.6.1.23 Engineered: Yes		Organism_scientific: Feline Immunodeficiency Virus Organism_taxid: 11673 Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_vector_type: Baculovirus Expression_system_plasmid: Fiv-34tf10
symmetry	Space Group: P 21 21 21	R_factor 0.221 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 68.770 72.000 77.280 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	UDP	enzyme	Hydrolase E.C.3.6.1.23 BRENDA
related structures	by homologous chain: 1F7Q, 1F7R
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	Structures of feline immunodeficiency virus dUTP pyrophosphatase and its nucleotide complexes in three crystal forms., Prasad GS, Stura EA, Elder JH, Stout CD, Acta Crystallogr D Biol Crystallogr 2000 Sep;56 ( Pt 9):1100-9. PMID:10957629

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk] Biological Unit Coordinates (1f7p.pdb1.gz) 56 Kb LPC: Ligand-Protein Contacts for 1F7P CSU: Contacts of Structural Units for 1F7P Likely Quarternary Molecular Structure file(s) for 1F7P Retrieve 1F7P in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1F7P from S2C, [Save to disk]

View 1F7P in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1F7P

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1F7P, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1f7pa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1f7pb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1f7pc_, region C [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1f7p_C] [1f7p_A] [1f7p_B] [1f7p] SWISS-PROT database: [P16088] Domain organization of [POL_FIVPE] by SWISSPFAM

Other resources with information on 1F7P

Community annotation for 1F7P at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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