1F94 THE 0.97 RESOLUTION STRUCTURE OF BUCANDIN, A NOVEL TOXIN ISOLATED FROM THE MALAYAN KRAIT date
authors Kuhn, P., Deacon, A.M., Comoso, S., Rajaseger, G., Kini, R.M., Uson, I., Kolatkar, P.R.
compound source
symmetry
R_factor
R_Free 0.177
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 0.97
note 1F94 is a representative structure
related structures by homologous chain: 1IJC
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


    • Primary referenceThe atomic resolution structure of bucandin, a novel toxin isolated from the Malayan krait, determined by direct methods., Kuhn P, Deacon AM, Comoso S, Rajaseger G, Kini RM, Uson I, Kolatkar PR, Acta Crystallogr D Biol Crystallogr 2000 Nov;56 ( Pt 11):1401-7. PMID:11053837
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (1f94.pdb1.gz) 35 Kb
  • CSU: Contacts of Structural Units for 1F94
  • Likely Quarternary Molecular Structure file(s) for 1F94
  • Structure Factors (231 Kb)
  • Retrieve 1F94 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1F94 from S2C, [Save to disk]
  • Re-refined 1f94 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1F94 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1F94
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1F94 from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1F94, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1f94a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1f94] [1f94_A]
  • SWISS-PROT database: [P81782]
  • Domain organization of [BUCA_BUNCA] by SWISSPFAM
    • Other resources with information on 1F94
  • Community annotation for 1F94 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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