1F9X Apoptosis Inhibitor date Jul 11, 2000
title Average Nmr Solution Structure Of The Bir-3 Domain Of Xiap
authors C.Sun, M.Cai, R.P.Meadows, S.W.Fesik
compound source
Molecule: Inhibitor Of Apoptosis Protein Xiap
Chain: A
Fragment: Residues 241-356
Synonym: Apoptosis Inhibitor 3
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b
methodSolution NMR
ligand ZN enzyme
related structures by homologous chain: 1TFT
Primary referenceNMR structure and mutagenesis of the third Bir domain of the inhibitor of apoptosis protein XIAP., Sun C, Cai M, Meadows RP, Xu N, Gunasekera AH, Herrmann J, Wu JC, Fesik SW, J Biol Chem 2000 Oct 27;275(43):33777-81. PMID:10934209
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (1f9x.pdb1.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 1F9X
  • CSU: Contacts of Structural Units for 1F9X
  • Retrieve 1F9X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1F9X from S2C, [Save to disk]
    • View 1F9X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1F9X
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1F9X, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1f9xa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1f9x] [1f9x_A]
  • SWISS-PROT database: [P98170]
  • Domain organization of [XIAP_HUMAN] by SWISSPFAM
  • Domain found in 1F9X: [BIR ] by SMART
    • Other resources with information on 1F9X
  • Community annotation for 1F9X at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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