OCA Atlas for 1FBR

1FBR

Cell Adhesion Protein

date

Aug 08, 1995

title

Fourth And Fifth Fibronectin Type I Module Pair

authors

I.Q.H.Phan, M.J.Williams, I.D.Campbell

compound

source

Molecule: Fibronectin
Chain: A
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Plasma
Gene: Human Fibronectin
Expression_system: Saccharomyces Cerevisiae
Expression_system_common: Baker'S Yeast
Expression_system_taxid: 4932
Expression_system_plasmid: Pma91
Expression_system_gene: Human Fibronectin
Other_details: Extracellular

method

Solution NMR

Gene
Ontology

Chain	Function	Process	Component
A

Primary reference

Solution structure of a pair of fibronectin type 1 modules with fibrin binding activity., Williams MJ, Phan I, Harvey TS, Rostagno A, Gold LI, Campbell ID, J Mol Biol 1994 Jan 28;235(4):1302-11. PMID:8308892

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]

Biological Unit Coordinates (1fbr.pdb1.gz) 26 Kb

CSU: Contacts of Structural Units for 1FBR

Retrieve 1FBR in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1FBR from S2C, [Save to disk]

View 1FBR in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1FBR

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

3D motif for 1FBR, from MSDmotif at EBI

Genome occurence of 1FBR's fold from GeneCensus

Classification of representative domains in scop (Structural Classification of Proteins)
- Domain d1fbr_1, region 1-46 [Jmol] [rasmolscript] [script source]
- Domain d1fbr_2, region 47-93 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1fbr] [1fbr_A]

SWISS-PROT database: [P02751]

Domain organization of [FINC_HUMAN] by SWISSPFAM

Domain found in 1FBR: [FN1 ] by SMART

Other resources with information on 1FBR

Community annotation for 1FBR at PDBWiki (http://pdbwiki.org)

MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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