1FDG BINDING OF A MACROCYCLIC BISACRIDINE AND AMETANTRONE TO CGTACG INVOLVES SIMILAR UNUSUAL INTERCALATION PLATFORMS (AMETANTRONE COMPLEX) date
authors Yang, X.L., Robinson, H., Gao, Y.G., Wang, A.H.J.
compound source
symmetry
R_factor
R_Free 0.3140000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.60
ligand 9TA, CO, MG enzyme
Primary referenceBinding of a macrocyclic bisacridine and ametantrone to CGTACG involves similar unusual intercalation platforms., Yang XL, Robinson H, Gao YG, Wang AH, Biochemistry 2000 Sep 12;39(36):10950-7. PMID:10998231
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (10 Kb) [Save to disk]
  • Biological Unit Coordinates (1fdg.pdb1.gz) 6 Kb
  • LPC: Ligand-Protein Contacts for 1FDG
  • CSU: Contacts of Structural Units for 1FDG
  • Likely Quarternary Molecular Structure file(s) for 1FDG
  • Structure Factors (40 Kb)
  • Retrieve 1FDG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FDG from S2C, [Save to disk]
  • Re-refined 1fdg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1FDG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FDG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FDG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fdg_A] [1fdg_B] [1fdg]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1FDG
  • Community annotation for 1FDG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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