1FEP Membrane Protein date Nov 24, 1998
title Ferric Enterobactin Receptor
authors S.K.Buchanan, B.S.Smith, L.Ventatramani, D.Xia, L.Esser, M.Palnit R.Chakraborty, D.Van Der Helm, J.Deisenhofer
compound source
Molecule: Ferric Enterobactin Receptor
Chain: A
Synonym: Fepa
Organism_scientific: Escherichia Coli K12
Organism_taxid: 83333
Strain: K-12
Other_details: Gene: Fepa
symmetry Space Group: C 2 2 21
R_factor 0.236 R_Free 0.282
crystal
cell
length a length b length c angle alpha angle beta angle gamma
112.300 127.600 135.700 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of the outer membrane active transporter FepA from Escherichia coli., Buchanan SK, Smith BS, Venkatramani L, Xia D, Esser L, Palnitkar M, Chakraborty R, van der Helm D, Deisenhofer J, Nat Struct Biol 1999 Jan;6(1):56-63. PMID:9886293
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (115 Kb) [Save to disk]
  • Biological Unit Coordinates (1fep.pdb1.gz) 110 Kb
  • LPC: Ligand-Protein Contacts for 1FEP
  • CSU: Contacts of Structural Units for 1FEP
  • Likely Quarternary Molecular Structure file(s) for 1FEP
  • Retrieve 1FEP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FEP from S2C, [Save to disk]
  • View 1FEP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FEP
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FEP, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fepa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fep] [1fep_A]
  • SWISS-PROT database: [P05825]
  • Belongs to the outer membrane receptor (omr) family according to TCDB.
  • Domain organization of [FEPA_ECOLI] by SWISSPFAM
  • Other resources with information on 1FEP
  • Community annotation for 1FEP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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