1FFX Structural Protein date Jul 26, 2000
title Tubulin:Stathmin-Like Domain Complex
authors B.Gigant, C.Martin-Barbey, M.Knossow
compound source
Molecule: Protein (Tubulin)
Chain: A, C
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Brain

Molecule: Protein (Tubulin)
Chain: B, D

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Brain

Molecule: Protein (Stathmin-Like Domain Of Rb3)
Chain: E
Synonym: Rb3
Engineered: Yes

Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Organ: Brain
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 65
R_factor 0.267 R_Free 0.367
crystal
cell
length a length b length c angle alpha angle beta angle gamma
328.500 328.500 54.400 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.95 Å
ligand GDP, GTP enzyme
note 1FFX (Molecule of the Month:pdb175)
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B


Primary referenceThe 4 A X-ray structure of a tubulin:stathmin-like domain complex., Gigant B, Curmi PA, Martin-Barbey C, Charbaut E, Lachkar S, Lebeau L, Siavoshian S, Sobel A, Knossow M, Cell 2000 Sep 15;102(6):809-16. PMID:11030624
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (256 Kb) [Save to disk]
  • Biological Unit Coordinates (1ffx.pdb1.gz) 249 Kb
  • LPC: Ligand-Protein Contacts for 1FFX
  • CSU: Contacts of Structural Units for 1FFX
  • Likely Quarternary Molecular Structure file(s) for 1FFX
  • Retrieve 1FFX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FFX from S2C, [Save to disk]
  • View 1FFX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FFX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FFX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ffxa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ffxb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1ffxc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1ffxd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1ffxe_, region E [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ffx_C] [1ffx_A] [1ffx_B] [1ffx_D] [1ffx] [1ffx_E]
  • SWISS-PROT database: [P02550] [P02554]
  • Domain organization of [TBA1A_PIG] [TBB_PIG] by SWISSPFAM
  • Domains found in 1FFX: [Tubulin] [Tubulin_C ] by SMART
  • Other resources with information on 1FFX
  • Community annotation for 1FFX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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