1FGV Immune System date Nov 01, 1993
title X-Ray Structures Of Fragments From Binding And Nonbinding Ve A Humanized Anti-Cd18 Antibody: Structural Indications Of T Role Of Vh Residues 59 To 65
authors C.Eigenbrot, J.Kessler
compound source
Molecule: H52 Fv (Light Chain)
Chain: L
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606

Molecule: H52 Fv (Heavy Chain)
Chain: H
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: C 1 2 1
R_factor 0.180 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
64.200 61.300 51.800 90.00 99.00 90.00
method X-Ray Diffractionresolution 1.90 Å
related structures by homologous chain: 1DVF, 1EK3, 1JTP, 1OP9, 1WTL, 2FB4, 2FBJ
Primary referenceX-ray structures of fragments from binding and nonbinding versions of a humanized anti-CD18 antibody: structural indications of the key role of VH residues 59 to 65., Eigenbrot C, Gonzalez T, Mayeda J, Carter P, Werther W, Hotaling T, Fox J, Kessler J, Proteins 1994 Jan;18(1):49-62. PMID:7908437
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (1fgv.pdb1.gz) 38 Kb
  • CSU: Contacts of Structural Units for 1FGV
  • Likely Quarternary Molecular Structure file(s) for 1FGV
  • Retrieve 1FGV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FGV from S2C, [Save to disk]
    • View 1FGV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1FGV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FGV, from MSDmotif at EBI
  • Genome occurence of 1FGV's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fgvh_, region H [Jmol] [rasmolscript] [script source]
        - Domain d1fgvl_, region L [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fgv_H] [1fgv] [1fgv_L]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 1FGV: [IGv ] by SMART
    • Other resources with information on 1FGV
  • Community annotation for 1FGV at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1FGV from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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