1FK5 Lipid Transport date Aug 09, 2000
title Structural Basis Of Non-Specific Lipid Binding In Maize Lipi Protein Complexes With Oleic Acid Revealed By High-Resoluti Crystallography
authors G.W.Han, J.Y.Lee, H.K.Song, D.H.Shin, S.W.Suh
compound source
Molecule: Nonspecific Lipid-Transfer Protein
Chain: A
Organism_scientific: Zea Mays
Organism_taxid: 4577
symmetry Space Group: P 21 21 21
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
24.676 49.717 69.204 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.30 Å
ligand FMT, OLA enzyme
related structures by homologous chain: 1RZL
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of non-specific lipid binding in maize lipid-transfer protein complexes revealed by high-resolution X-ray crystallography., Han GW, Lee JY, Song HK, Chang C, Min K, Moon J, Shin DH, Kopka ML, Sawaya MR, Yuan HS, Kim TD, Choe J, Lim D, Moon HJ, Suh SW, J Mol Biol 2001 Apr 27;308(2):263-78. PMID:11327766
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (20 Kb) [Save to disk]
  • Biological Unit Coordinates (1fk5.pdb1.gz) 16 Kb
  • LPC: Ligand-Protein Contacts for 1FK5
  • CSU: Contacts of Structural Units for 1FK5
  • Likely Quarternary Molecular Structure file(s) for 1FK5
  • Structure Factors (168 Kb)
  • Retrieve 1FK5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FK5 from S2C, [Save to disk]
  • Re-refined 1fk5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1FK5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FK5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1FK5 from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FK5, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fk5a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fk5_A] [1fk5]
  • SWISS-PROT database: [P19656]
  • Domain organization of [NLTP_MAIZE] by SWISSPFAM
  • Domain found in 1FK5: [AAI ] by SMART
  • Other resources with information on 1FK5
  • Community annotation for 1FK5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1FK5 from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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