1FP7 Ligase date Aug 30, 2000
title Monovalent Cation Binding Sites In N10-Formyltetrahydrofolat Synthetase From Moorella Thermoacetica
authors R.Radfar, A.Leaphart, J.M.Brewer, W.Minor, J.D.Odom
compound source
Molecule: Formate--Tetrahydrofolate Ligase
Chain: A, B
Synonym: Formyltetrahydrofolate Synthetase
Ec: 6.3.4.3
Engineered: Yes
Organism_scientific: Moorella Thermoacetica
Organism_taxid: 1525
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pcrl47 S2a
symmetry Space Group: H 3 2
R_factor 0.285 R_Free 0.355
crystal
cell
length a length b length c angle alpha angle beta angle gamma
160.876 160.876 256.118 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.20 Å
ligand K, SO4 enzyme Ligase E.C.6.3.4.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCation binding and thermostability of FTHFS monovalent cation binding sites and thermostability of N10-formyltetrahydrofolate synthetase from Moorella thermoacetica., Radfar R, Leaphart A, Brewer JM, Minor W, Odom JD, Dunlap RB, Lovell CR, Lebioda L, Biochemistry 2000 Nov 28;39(47):14481-6. PMID:11087401
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk]
  • Biological Unit Coordinates (1fp7.pdb1.gz) 337 Kb
  • LPC: Ligand-Protein Contacts for 1FP7
  • CSU: Contacts of Structural Units for 1FP7
  • Likely Quarternary Molecular Structure file(s) for 1FP7
  • Retrieve 1FP7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FP7 from S2C, [Save to disk]
  • View 1FP7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FP7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FP7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fp7a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1fp7b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fp7_B] [1fp7] [1fp7_A]
  • SWISS-PROT database: [P21164]
  • Domain organization of [FTHS_MOOTH] by SWISSPFAM
  • Other resources with information on 1FP7
  • Community annotation for 1FP7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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