1FVA Oxidoreductase date Sep 19, 2000
title Crystal Structure Of Bovine Methionine Sulfoxide Reductase
authors W.T.Lowther, N.Brot, H.Weissbach, B.W.Matthews
compound source
Molecule: Peptide Methionine Sulfoxide Reductase
Chain: A, B
Ec: 1.8.4.6
Engineered: Yes
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet28b
symmetry Space Group: P 1 21 1
R_factor 0.207 R_Free 0.280
crystal
cell
length a length b length c angle alpha angle beta angle gamma
53.710 66.199 62.137 90.00 90.99 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand
enzyme Oxidoreductase E.C.1.8.4.6 BRENDA
related structures by homologous chain: 1FVG
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure and mechanism of peptide methionine sulfoxide reductase, an "anti-oxidation" enzyme., Lowther WT, Brot N, Weissbach H, Matthews BW, Biochemistry 2000 Nov 7;39(44):13307-12. PMID:11063566
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk]
  • Biological Unit Coordinates (1fva.pdb1.gz) 33 Kb
  • Biological Unit Coordinates (1fva.pdb2.gz) 34 Kb
  • CSU: Contacts of Structural Units for 1FVA
  • Likely Quarternary Molecular Structure file(s) for 1FVA
  • Structure Factors (313 Kb)
  • Retrieve 1FVA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FVA from S2C, [Save to disk]
  • Re-refined 1fva structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1FVA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FVA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FVA, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fvaa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1fvab_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fva_A] [1fva_B] [1fva]
  • SWISS-PROT database: [P54149]
  • Domain organization of [MSRA_BOVIN] by SWISSPFAM
  • Other resources with information on 1FVA
  • Community annotation for 1FVA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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