1FVR Transferase date Sep 20, 2000
title Tie2 Kinase Domain
authors L.M.Shewchuk, A.M.Hassell, B.Ellis, W.D.Holmes, R.Davis, E.L.Horn S.H.Kadwell, D.D.Mckee, J.T.Moore
compound source
Molecule: Tyrosine-Protein Kinase Tie-2
Chain: A, B
Fragment: Kinase Domain
Ec: 2.7.1.112
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469
symmetry Space Group: P 1 21 1
R_factor 0.225 R_Free 0.225
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.494 92.887 70.798 90.00 108.93 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand
enzyme Transferase E.C.2.7.1.112 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the Tie2 RTK domain: self-inhibition by the nucleotide binding loop, activation loop, and C-terminal tail., Shewchuk LM, Hassell AM, Ellis B, Holmes WD, Davis R, Horne EL, Kadwell SH, McKee DD, Moore JT, Structure Fold Des 2000 Nov 15;8(11):1105-13. PMID:11080633
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (1fvr.pdb1.gz) 53 Kb
  • Biological Unit Coordinates (1fvr.pdb2.gz) 52 Kb
  • CSU: Contacts of Structural Units for 1FVR
  • Likely Quarternary Molecular Structure file(s) for 1FVR
  • Structure Factors (803 Kb)
  • Retrieve 1FVR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FVR from S2C, [Save to disk]
  • Re-refined 1fvr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1FVR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FVR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FVR, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fvra_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1fvrb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fvr_A] [1fvr] [1fvr_B]
  • SWISS-PROT database: [Q02763]
  • Domain organization of [TIE2_HUMAN] by SWISSPFAM
  • Domain found in 1FVR: [TyrKc ] by SMART
  • Other resources with information on 1FVR
  • Community annotation for 1FVR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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