1FWK Transferase date Sep 22, 2000
title Crystal Structure Of Homoserine Kinase Complexed With Adp
authors T.Zhou, M.Daugherty, N.V.Grishin, A.L.Osterman, H.Zhang
compound source
Molecule: Homoserine Kinase
Chain: A, B, C, D
Synonym: Hk
Ec: 2.7.1.39
Engineered: Yes
Organism_scientific: Methanocaldococcus Jannaschii
Organism_taxid: 2190
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.209 R_Free 0.246
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.206 129.147 109.773 90.00 105.52 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand ADP, MG enzyme Transferase E.C.2.7.1.39 BRENDA
related structures by homologous chain: 1FWL, 1H73
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructure and mechanism of homoserine kinase: prototype for the GHMP kinase superfamily., Zhou T, Daugherty M, Grishin NV, Osterman AL, Zhang H, Structure Fold Des 2000 Dec 15;8(12):1247-57. PMID:11188689
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (199 Kb) [Save to disk]
  • Biological Unit Coordinates (1fwk.pdb1.gz) 98 Kb
  • Biological Unit Coordinates (1fwk.pdb2.gz) 99 Kb
  • Biological Unit Coordinates (1fwk.pdb3.gz) 194 Kb
  • LPC: Ligand-Protein Contacts for 1FWK
  • CSU: Contacts of Structural Units for 1FWK
  • Likely Quarternary Molecular Structure file(s) for 1FWK
  • Retrieve 1FWK in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FWK from S2C, [Save to disk]
  • View 1FWK in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FWK
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FWK, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fwka2, region A:168-300 [Jmol] [rasmolscript] [script source]
        - Domain d1fwka1, region A:5-167 [Jmol] [rasmolscript] [script source]
        - Domain d1fwkb2, region B:168-300 [Jmol] [rasmolscript] [script source]
        - Domain d1fwkb1, region B:5-167 [Jmol] [rasmolscript] [script source]
        - Domain d1fwkc2, region C:168-300 [Jmol] [rasmolscript] [script source]
        - Domain d1fwkc1, region C:5-167 [Jmol] [rasmolscript] [script source]
        - Domain d1fwkd2, region D:168-300 [Jmol] [rasmolscript] [script source]
        - Domain d1fwkd1, region D:5-167 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fwk_D] [1fwk_A] [1fwk] [1fwk_C] [1fwk_B]
  • SWISS-PROT database: [Q58504]
  • Domain organization of [KHSE_METJA] by SWISSPFAM
  • Other resources with information on 1FWK
  • Community annotation for 1FWK at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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