1G3R Cell Cycle, Hydrolase date Oct 25, 2000
title Crystal Structure Analysis Of Pyrococcus Furiosus Cell Divis Mind
authors I.Hayashi, T.Oyama, K.Morikawa
compound source
Molecule: Cell Division Inhibitor
Chain: A
Synonym: Mind Atpase
Engineered: Yes
Other_details: Amppcp-Bound Form
Organism_scientific: Pyrococcus Furiosus
Organism_taxid: 2261
Gene: Mind
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: P 21 3
R_factor 0.209 R_Free 0.251
crystal
cell
length a length b length c angle alpha angle beta angle gamma
98.644 98.644 98.644 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand ACP, MG enzyme
related structures by homologous chain: 1ION
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural and functional studies of MinD ATPase: implications for the molecular recognition of the bacterial cell division apparatus., Hayashi I, Oyama T, Morikawa K, EMBO J 2001 Apr 17;20(8):1819-28. PMID:11296216
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (43 Kb) [Save to disk]
  • Biological Unit Coordinates (1g3r.pdb1.gz) 38 Kb
  • LPC: Ligand-Protein Contacts for 1G3R
  • CSU: Contacts of Structural Units for 1G3R
  • Likely Quarternary Molecular Structure file(s) for 1G3R
  • Retrieve 1G3R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1G3R from S2C, [Save to disk]
  • View 1G3R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1G3R
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1G3R, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1g3ra_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1g3r] [1g3r_A]
  • SWISS-PROT database: [Q8U3I1]
  • Domain organization of [Q8U3I1_PYRFU] by SWISSPFAM
  • Other resources with information on 1G3R
  • Community annotation for 1G3R at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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