1G3V CRYSTAL STRUCTURE OF NICKEL-D[CGTGTACACG]2 date
authors Subirana, J.A., Abrescia, N.G.A.
compound source
symmetry
R_factor
R_Free 0.2700000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.10
ligand NI enzyme
Primary referenceNickel-guanine interactions in DNA: crystal structure of nickel-d[CGTGTACACG]2., Abrescia NA, Huynh-Dinh T, Subirana JA, J Biol Inorg Chem 2002 Jan;7(1-2):195-9. PMID:11862555
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (1g3v.pdb1.gz) 8 Kb
  • Biological Unit Coordinates (1g3v.pdb2.gz) 8 Kb
  • LPC: Ligand-Protein Contacts for 1G3V
  • CSU: Contacts of Structural Units for 1G3V
  • Likely Quarternary Molecular Structure file(s) for 1G3V
  • Structure Factors (22 Kb)
  • Retrieve 1G3V in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1G3V from S2C, [Save to disk]
  • Re-refined 1g3v structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1G3V in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1G3V
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1G3V, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1g3v_C] [1g3v_A] [1g3v_B] [1g3v_D] [1g3v]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 1G3V
  • Community annotation for 1G3V at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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