1G5Z Immune System date Nov 02, 2000
title Crystal Structure Of Lyme Disease Antigen Outer Surface Prot (Ospc) From Borrelia Burgdorferi Strain N40
authors C.Eicken, V.Sharma, T.Klabunde, R.T.Owens, D.S.Pikas, M.Hook, J.C.Sacchettini
compound source
Molecule: Outer Surface Protein C
Chain: A
Engineered: Yes
 Organism_scientific: Borrelia Burgdorferi
Organism_common: Lyme Disease Spirochete
Organism_taxid: 139
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 2
R_factor 0.196 R_Free 0.260
crystal
cell
length a length b length c angle alpha angle beta angle gamma
32.079 47.052 110.607 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.51 Å
related structures by homologous chain: 1F1M, 1GGQ
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of Lyme disease antigen outer surface protein C from Borrelia burgdorferi., Eicken C, Sharma V, Klabunde T, Owens RT, Pikas DS, Hook M, Sacchettini JC, J Biol Chem 2001 Mar 30;276(13):10010-5. PMID:11139584
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (1g5z.pdb1.gz) 57 Kb
  • CSU: Contacts of Structural Units for 1G5Z
  • Likely Quarternary Molecular Structure file(s) for 1G5Z
  • Structure Factors (54 Kb)
  • Retrieve 1G5Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1G5Z from S2C, [Save to disk]
  • Re-refined 1g5z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1G5Z in 3D
  • Proteopedia, because life has more than 2D.
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    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1G5Z, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1g5za_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1g5z] [1g5z_A]
  • SWISS-PROT database: [O31117]
  • Domain organization of [O31117_BORBU] by SWISSPFAM
    • Other resources with information on 1G5Z
  • Community annotation for 1G5Z at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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