1G67 Transferase date Nov 03, 2000
title Thiamin Phosphate Synthase
authors D.H.Peapus, H.J.Chiu, N.Campobasso, J.J.Reddick, T.P.Begley, S.E
compound source
Molecule: Thiamin Phosphate Synthase
Chain: A, B
Ec: 2.5.1.3
Engineered: Yes
Mutation: Yes
Other_details: Complexed With 2-Methyl-5-Methylene-5h-Pyrim Ylideneamine, 4-Methyl-5-Hydroxyethylthiazole Phosphate And Pyrophosphate
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Gene: Thic
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Sg13009 With Prep4
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pyzc6927
symmetry Space Group: P 43 21 2
R_factor 0.216 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.980 76.980 140.150 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.40 Å
ligand ICP, MG, POP, TZP enzyme Transferase E.C.2.5.1.3 BRENDA
related structures by homologous chain: 1G69, 1G6C
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural characterization of the enzyme-substrate, enzyme-intermediate, and enzyme-product complexes of thiamin phosphate synthase., Peapus DH, Chiu HJ, Campobasso N, Reddick JJ, Begley TP, Ealick SE, Biochemistry 2001 Aug 28;40(34):10103-14. PMID:11513589
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (79 Kb) [Save to disk]
  • Biological Unit Coordinates (1g67.pdb1.gz) 38 Kb
  • Biological Unit Coordinates (1g67.pdb2.gz) 39 Kb
  • LPC: Ligand-Protein Contacts for 1G67
  • CSU: Contacts of Structural Units for 1G67
  • Likely Quarternary Molecular Structure file(s) for 1G67
  • Structure Factors (583 Kb)
  • Retrieve 1G67 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1G67 from S2C, [Save to disk]
  • Re-refined 1g67 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1G67 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1G67
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1G67 1G67A 1G67B from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1G67, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1g67a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1g67b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1g67_A] [1g67] [1g67_B]
  • SWISS-PROT database: [P39594]
  • Domain organization of [THIE_BACSU] by SWISSPFAM
  • Other resources with information on 1G67
  • Community annotation for 1G67 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science