1G7X Transferase date Nov 15, 2000
title Aspartate Aminotransferase Active Site Mutant N194ar292lr3
authors H.Mizuguchi, H.Hayashi, K.Okada, I.Miyahara, K.Hirotsu, H.Kagamiy
compound source
Molecule: Aspartate Aminotransferase
Chain: A
Ec: 2.6.1.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.229 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
155.390 89.290 79.900 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand PLP enzyme Transferase E.C.2.6.1.1 BRENDA
related structures by homologous chain: 1G4X, 1G7W
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStrain is more important than electrostatic interaction in controlling the pKa of the catalytic group in aspartate aminotransferase., Mizuguchi H, Hayashi H, Okada K, Miyahara I, Hirotsu K, Kagamiyama H, Biochemistry 2001 Jan 16;40(2):353-60. PMID:11148029
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (69 Kb) [Save to disk]
  • Biological Unit Coordinates (1g7x.pdb1.gz) 127 Kb
  • LPC: Ligand-Protein Contacts for 1G7X
  • CSU: Contacts of Structural Units for 1G7X
  • Likely Quarternary Molecular Structure file(s) for 1G7X
  • Retrieve 1G7X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1G7X from S2C, [Save to disk]
  • View 1G7X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1G7X
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1G7X, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1g7xa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1g7x_A] [1g7x]
  • SWISS-PROT database: [P00509]
  • Domain organization of [AAT_ECOLI] by SWISSPFAM
  • Other resources with information on 1G7X
  • Community annotation for 1G7X at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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