1GAU Transcription Dna date Jun 28, 1993
title Solution Structure Of The Specific Dna Complex Of The Zinc C Dna Binding Domain Of The Erythroid Transcription Factor Ga Multidimensional Nmr
authors G.M.Clore, J.G.Omichinski, A.M.Gronenborn
compound source
Molecule: Dna (5'-D(Papgpaptpapapapc)-3')
Chain: B
Engineered: Yes
Synthetic: Yes

Molecule: Dna (5'-D(Pgptptptpaptpcpt)-3')
Chain: C
Engineered: Yes

Synthetic: Yes

Molecule: Erythroid Transcription Factor Gata-1
Chain: A

Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
methodSolution NMR
related structures by homologous chain: 1GAT
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR structure of a specific DNA complex of Zn-containing DNA binding domain of GATA-1., Omichinski JG, Clore GM, Schaad O, Felsenfeld G, Trainor C, Appella E, Stahl SJ, Gronenborn AM, Science. 1993 Jul 23;261(5120):438-46. PMID:8332909
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (738 Kb) [Save to disk]
  • Biological Unit Coordinates (1gau.pdb1.gz) 25 Kb
  • CSU: Contacts of Structural Units for 1GAU
  • Retrieve 1GAU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GAU from S2C, [Save to disk]
  • View 1GAU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1GAU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GAU, from MSDmotif at EBI
  • Genome occurence of 1GAU's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gaua_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gau] [1gau_C] [1gau_A] [1gau_B]
  • SWISS-PROT database: [P17678]
  • Domain organization of [GATA1_CHICK] by SWISSPFAM
  • Domain found in 1GAU: [ZnF_GATA ] by SMART
  • Other resources with information on 1GAU
  • Community annotation for 1GAU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1GAU from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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