1GCB	Dna Binding Protein	date	Jul 18, 1995
title	Gal6, Yeast Bleomycin Hydrolase Dna-Binding Protease (Thiol)
authors	L.Joshua-Tor, H.E.Xu, S.A.Johnston, D.C.Rees
compound		source
Molecule: Gal6 Hg (Emts) Derivative Chain: A Engineered: Yes		Organism_scientific: Saccharomyces Cerevisiae Organism_common: Baker'S Yeast Organism_taxid: 4932 Strain: Sc277 Expression_system: Saccharomyces Cerevisiae Expression_system_common: Baker'S Yeast Expression_system_taxid: 4932
symmetry	Space Group: P 63 2 2	R_factor 0.209 R_Free 0.274
crystal cell	length a length b length c angle alpha angle beta angle gamma 151.150 151.150 89.880 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	GOL, HG, SO4	enzyme
related structures	by homologous chain: 1A6R
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structure of a conserved protease that binds DNA: the bleomycin hydrolase, Gal6., Joshua-Tor L, Xu HE, Johnston SA, Rees DC, Science 1995 Aug 18;269(5226):945-50. PMID:7638617

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk] Biological Unit Coordinates (1gcb.pdb1.gz) 459 Kb LPC: Ligand-Protein Contacts for 1GCB CSU: Contacts of Structural Units for 1GCB Likely Quarternary Molecular Structure file(s) for 1GCB Retrieve 1GCB in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1GCB from S2C, [Save to disk]

View 1GCB in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1GCB

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1GCB, from MSDmotif at EBI Genome occurence of 1GCB's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1gcb__, region [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1gcb] [1gcb_A] SWISS-PROT database: [Q01532] Domain organization of [BLH1_YEAST] by SWISSPFAM

Other resources with information on 1GCB

Community annotation for 1GCB at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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