1GES Oxidoreductase(Flavoenzyme) date Jan 18, 1994
title Anatomy Of An Engineered Nad-Binding Site
authors P.R.E.Mittl, G.E.Schulz
compound source
Molecule: Glutathione Reductase
Chain: A, B
Ec: 1.6.4.2
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
symmetry Space Group: P 1 1 21
R_factor 0.168 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
120.000 72.800 61.000 90.00 90.00 82.80
method X-Ray Diffractionresolution 1.74 Å
ligand FAD enzyme Oxidoreductase E.C.1.6.4.2 BRENDA
related structures by homologous chain: 1GER
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • glutathione-disulfide reduct...


    • Primary referenceAnatomy of an engineered NAD-binding site., Mittl PR, Berry A, Scrutton NS, Perham RN, Schulz GE, Protein Sci 1994 Sep;3(9):1504-14. PMID:7833810
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk]
  • Biological Unit Coordinates (1ges.pdb1.gz) 149 Kb
  • LPC: Ligand-Protein Contacts for 1GES
  • CSU: Contacts of Structural Units for 1GES
  • Likely Quarternary Molecular Structure file(s) for 1GES
  • Structure Factors (606 Kb)
  • Retrieve 1GES in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GES from S2C, [Save to disk]
  • Re-refined 1ges structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1GES in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1GES
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GES, from MSDmotif at EBI
  • Genome occurence of 1GES's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gesa2, region A:147-262 [Jmol] [rasmolscript] [script source]
        - Domain d1gesa1, region A:3-146,A:263-335 [Jmol] [rasmolscript] [script source]
        - Domain d1gesa3, region A:336-450 [Jmol] [rasmolscript] [script source]
        - Domain d1gesb2, region B:147-262 [Jmol] [rasmolscript] [script source]
        - Domain d1gesb1, region B:2-146,B:263-335 [Jmol] [rasmolscript] [script source]
        - Domain d1gesb3, region B:336-450 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ges_A] [1ges] [1ges_B]
  • SWISS-PROT database: [P06715]
  • Domain organization of [GSHR_ECOLI] by SWISSPFAM
    • Other resources with information on 1GES
  • Community annotation for 1GES at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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