1GG6 Hydrolase Hydrolase Inhibitor date Jul 31, 2000
title Crystal Structure Of Gamma Chymotrypsin With N-Acetyl-Phenyl Trifluoromethyl Ketone Bound At The Active Site
authors D.Neidhart, Y.Wei, C.Cassidy, J.Lin, W.W.Cleland, P.A.Frey
compound source
Molecule: Gamma Chymotrypsin
Chain: A
Ec: 3.4.21.1
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Pancreas

Molecule: Gamma Chymotrypsin
Chain: B
Ec: 3.4.21.1

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Pancreas

Molecule: Gamma Chymotrypsin
Chain: C
Ec: 3.4.21.1

Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Pancreas
symmetry Space Group: P 42 21 2
R_factor 0.175 R_Free 0.212
crystal
cell
length a length b length c angle alpha angle beta angle gamma
69.190 69.190 95.440 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.40 Å
ligand APF, APL, EDO, SO4 enzyme Hydrolase E.C.3.4.21.1 BRENDA
related structures by homologous chain: 1GGD
Gene
Ontology
ChainFunctionProcessComponent
B


C


Primary referenceCorrelation of low-barrier hydrogen bonding and oxyanion binding in transition state analogue complexes of chymotrypsin., Neidhart D, Wei Y, Cassidy C, Lin J, Cleland WW, Frey PA, Biochemistry 2001 Feb 27;40(8):2439-47. PMID:11327865
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (1gg6.pdb1.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 1GG6
  • CSU: Contacts of Structural Units for 1GG6
  • Likely Quarternary Molecular Structure file(s) for 1GG6
  • Retrieve 1GG6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GG6 from S2C, [Save to disk]
  • View 1GG6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1GG6
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1GG6 1GG6A 1GG6B 1GG6C from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GG6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gg6.1, region A:,B:,C [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gg6_A] [1gg6] [1gg6_B] [1gg6_C]
  • SWISS-PROT database: [P00766]
  • Domain organization of [CTRA_BOVIN] by SWISSPFAM
  • Domain found in 1GG6: [Tryp_SPc ] by SMART
  • Other resources with information on 1GG6
  • Community annotation for 1GG6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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