1GLJ	Phosphotransferase	date	Sep 03, 1998
title	Escherichia Coli Glycerol Kinase Mutant With Bound Atp Analo Substantial Domain Motion
authors	C.E.Bystrom, D.W.Pettigrew, B.P.Branchaud, S.J.Remington
compound		source
Molecule: Glycerol Kinase Chain: Y, O Ec: 2.7.1.30 Engineered: Yes Mutation: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Organ: Seed Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Dg1 (De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pet28b Expression_system_gene: Glpk Other_details: Cloned Gene
symmetry	Space Group: C 2 2 21	R_factor 0.166 R_Free NULL
crystal cell	length a length b length c angle alpha angle beta angle gamma 99.668 200.699 114.733 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.00 Å
ligand	ATS, GOL, MG	enzyme	Transferase E.C.2.7.1.30 BRENDA
related structures	by homologous chain: 1BWF, 1GLE
Gene Ontology	Chain Function Process Component O, Y
Primary reference	Crystal structures of Escherichia coli glycerol kinase variant S58-->W in complex with nonhydrolyzable ATP analogues reveal a putative active conformation of the enzyme as a result of domain motion., Bystrom CE, Pettigrew DW, Branchaud BP, O'Brien P, Remington SJ, Biochemistry 1999 Mar 23;38(12):3508-18. PMID:10090737

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (164 Kb) [Save to disk] Biological Unit Coordinates (1glj.pdb1.gz) 158 Kb LPC: Ligand-Protein Contacts for 1GLJ CSU: Contacts of Structural Units for 1GLJ Likely Quarternary Molecular Structure file(s) for 1GLJ Structure Factors (139 Kb) Retrieve 1GLJ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1GLJ from S2C, [Save to disk] Re-refined 1glj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1GLJ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1GLJ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1GLJ, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1gljo1, region O:2-253 [Jmol] [rasmolscript] [script source]     - Domain d1gljo2, region O:254-499 [Jmol] [rasmolscript] [script source]     - Domain d1gljy1, region Y:2-253 [Jmol] [rasmolscript] [script source]     - Domain d1gljy2, region Y:254-499 [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1glj_Y] [1glj_O] [1glj] SWISS-PROT database: [P0A6F3] Domain organization of [GLPK_ECOLI] by SWISSPFAM

Other resources with information on 1GLJ

Community annotation for 1GLJ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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