1GMU Metallochaperone date Sep 24, 2001
title Structure Of Uree
authors H.K.Song, S.B.Mulrooney, R.Huber, R.Hausinger
compound source
Molecule: Uree
Chain: A, B, C, D
Fragment: Residues 1-143
Engineered: Yes
Mutation: Yes
 Organism_scientific: Klebsiella Aerogenes
Organism_taxid: 28451
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.223 R_Free 0.261
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.882 129.360 56.786 90.00 93.72 90.00
method X-Ray Diffractionresolution 1.5 Å
related structures by homologous chain: 1GMV, 1GMW
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceCrystal structure of Klebsiella aerogenes UreE, a nickel-binding metallochaperone for urease activation., Song HK, Mulrooney SB, Huber R, Hausinger RP, J Biol Chem 2001 Dec 28;276(52):49359-64. PMID:11591723
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (106 Kb) [Save to disk]
  • Biological Unit Coordinates (1gmu.pdb1.gz) 28 Kb
  • Biological Unit Coordinates (1gmu.pdb2.gz) 28 Kb
  • Biological Unit Coordinates (1gmu.pdb3.gz) 28 Kb
  • Biological Unit Coordinates (1gmu.pdb4.gz) 28 Kb
  • CSU: Contacts of Structural Units for 1GMU
  • Likely Quarternary Molecular Structure file(s) for 1GMU
  • Structure Factors (659 Kb)
  • Retrieve 1GMU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GMU from S2C, [Save to disk]
  • Re-refined 1gmu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1GMU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1GMU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Conformational Epitope Prediction for 1GMU 1GMUA 1GMUB 1GMUC 1GMUD from the CEP Server.
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GMU, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gmua1, region A:1-70 [Jmol] [rasmolscript] [script source]
        - Domain d1gmua2, region A:71-138 [Jmol] [rasmolscript] [script source]
        - Domain d1gmub1, region B:1-70 [Jmol] [rasmolscript] [script source]
        - Domain d1gmub2, region B:71-138 [Jmol] [rasmolscript] [script source]
        - Domain d1gmuc1, region C:1-70 [Jmol] [rasmolscript] [script source]
        - Domain d1gmuc2, region C:71-140 [Jmol] [rasmolscript] [script source]
        - Domain d1gmud1, region D:1-70 [Jmol] [rasmolscript] [script source]
        - Domain d1gmud2, region D:71-138 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gmu_B] [1gmu_C] [1gmu_D] [1gmu_A] [1gmu]
  • SWISS-PROT database: [P18317]
  • Domain organization of [UREE_KLEAE] by SWISSPFAM
  • Domain found in 1GMU: [UreE_N ] by SMART
    • Other resources with information on 1GMU
  • Community annotation for 1GMU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science