1GNP Gtp Binding Protein date May 11, 1995
title X-Ray Crystal Structure Analysis Of The Catalytic Domain Of Oncogene Product P21h-Ras Complexed With Caged Gtp And Mant
authors A.Scheidig, S.M.Franken, J.E.T.Corrie, G.P.Reid, A.Wittinghofer, R.S.Goody
compound source
Molecule: C-H-Ras P21 Protein
Chain: A
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
symmetry Space Group: P 32 2 1
R_factor 0.193 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
40.080 40.080 160.190 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.70 Å
ligand AGN, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceX-ray crystal structure analysis of the catalytic domain of the oncogene product p21H-ras complexed with caged GTP and mant dGppNHp., Scheidig AJ, Franken SM, Corrie JE, Reid GP, Wittinghofer A, Pai EF, Goody RS, J Mol Biol 1995 Oct 13;253(1):132-50. PMID:7473708
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (1gnp.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 1GNP
  • CSU: Contacts of Structural Units for 1GNP
  • Likely Quarternary Molecular Structure file(s) for 1GNP
  • Retrieve 1GNP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1GNP from S2C, [Save to disk]
    • View 1GNP in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1GNP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1GNP, from MSDmotif at EBI
  • Genome occurence of 1GNP's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1gnp__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1gnp_A] [1gnp]
  • SWISS-PROT database: [P01112]
  • Domain organization of [RASH_HUMAN] by SWISSPFAM
  • Domain found in 1GNP: [RAS ] by SMART
    • Other resources with information on 1GNP
  • Community annotation for 1GNP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Domain movements in 1GNP from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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